The NEBK web of TWiki. TWiki is a Web-Based Collaboration Platform for the Enterprise. http://www.neuroimaging.org.au/cgi-bin/twiki/view/NEBK Copyright 2012 by contributing authors 2012-03-21T00:28:06Z http://www.neuroimaging.org.au/cgi-bin/twiki/view/NEBK/DecomSoma 2012-03-21T00:28:06Z

Users with Data in personal store directories Amount User Name User Alternative Contact Contacted Status 1.4T alz Andrew Zalesky ... (last changed by NeilKilleen)

NeilKilleen http://www.neuroimaging.org.au/cgi-bin/twiki/view/NEBK/WebHome 2012-02-17T06:49:01Z

AIBL Research Services ANDS MetaData DaRIS Stress Test Soma Transfers nop NEBK Web Utilities WebTopicList all topics in alphabetical ... (last changed by NeilKilleen)

NeilKilleen http://www.neuroimaging.org.au/cgi-bin/twiki/view/NEBK/ANDSMetaData 2011-12-15T00:31:52Z

ID Owner Name Status 1.5.1 NeilKilleen Test Not provided 1.5.2 Gary Egan LIF EAE Optic Nerve Provided pssd project harvest done; meta ... (last changed by NeilKilleen)

NeilKilleen http://www.neuroimaging.org.au/cgi-bin/twiki/view/NEBK/AIBL_OVERVIEW 2011-11-23T03:34:15Z

NeilKilleen 29 Apr 2009 The AIBL and PIB studies The "PIB" study is an Austin project. It really refers to the acquisition of PET images for subjects with the PIB ... (last changed by NeilKilleen)

NeilKilleen http://www.neuroimaging.org.au/cgi-bin/twiki/view/NEBK/DaRISStressTest 2011-11-03T06:02:31Z

DaRIS Stress Test Enumerate the key processes in end to end user usage Create project, subject, study Edit these objects Upload data ... (last changed by NeilKilleen)

NeilKilleen http://www.neuroimaging.org.au/cgi-bin/twiki/view/NEBK/AIBL_METADATA 2011-10-21T05:09:07Z

Data Bases Data are maintained in the file system as described previously. Meta data are maintained in two locations: The Austin FileMakerPro data base holds ... (last changed by NeilKilleen)

NeilKilleen http://www.neuroimaging.org.au/cgi-bin/twiki/view/NEBK/ResearchServices 2011-07-07T06:57:37Z

Platform Development This document provides a list of questions relevant when thinking about developing new platform (lab compute) infrastructure. Platform Scope ... (last changed by NeilKilleen)

NeilKilleen http://www.neuroimaging.org.au/cgi-bin/twiki/view/NEBK/IWGDD-DM 2011-07-07T00:26:48Z

IWGDD Data Management Plan Elements Data management plan elements recommended by the IWGDD The following elements are very general aspects of data management that ... (last changed by NeilKilleen)

NeilKilleen http://www.neuroimaging.org.au/cgi-bin/twiki/view/NEBK/ADNI_PET 2011-06-21T06:28:27Z

PET Processing Human Data ADNI /raid/studies/PIB/Workspace/nkilleen/ADNI Input data are sourced from $PET RAW/ PIB ID Version NAME /Original ... (last changed by NeilKilleen)

NeilKilleen http://www.neuroimaging.org.au/cgi-bin/twiki/view/NEBK/ADNI_MR 2011-04-18T00:39:30Z

MR Processing Human Data ADNI /raid/studies/PIB/Workspace/nkilleen/ADNI Input data are sourced from $MR RAW/ PIB ID NAME / Version Output XML ... (last changed by NeilKilleen)

NeilKilleen http://www.neuroimaging.org.au/cgi-bin/twiki/view/NEBK/AIBLSoftware 2010-12-06T05:28:28Z

Software Just type the script name to see its usage. MR Data mvalidate validates MR data in the specified directory. Used to verify subject meta data ... (last changed by NeilKilleen)

NeilKilleen http://www.neuroimaging.org.au/cgi-bin/twiki/view/NEBK/AIBL_SOFTWARE 2010-12-06T05:26:43Z

Software Overview Data Bases FileMakerPro holds the Austin PIB data base. You need the FMP client (Max OS X) to access the PIB FMP data base BioGenix holds ... (last changed by NeilKilleen)

NeilKilleen http://www.neuroimaging.org.au/cgi-bin/twiki/view/NEBK/AIBLWorkflow 2010-11-11T00:53:23Z

Workflows Although there are scripts that do most of the work, the workflows have a number of steps, many of them manual. I have tried to make the Austin and Perth ... (last changed by NeilKilleen)

NeilKilleen http://www.neuroimaging.org.au/cgi-bin/twiki/view/NEBK/WebPreferences 2010-11-02T02:12:26Z

nop NEBK Web Preferences The following settings are web preferences of the NEBK web. These preferences overwrite the site level preferences in . and ... (last changed by SinaSadeghi)

SinaSadeghi http://www.neuroimaging.org.au/cgi-bin/twiki/view/NEBK/AIBL_DATA 2010-09-17T07:22:47Z

Data Structures All data is homed at the Department of Nuclear Medicine at the Austin on the raid file system. The root is $PIB ROOT /raid/studies/PIB Data flow ... (last changed by NeilKilleen)

NeilKilleen http://www.neuroimaging.org.au/cgi-bin/twiki/view/NEBK/ADNI_AIBL_ADNI_Conversion 2010-02-23T23:44:25Z

AIBL to ADNI Conversion Introduction Complementing the uploads of imaging data, we supply ADNI like tables with meta data describing 1) the non imaging data and ... (last changed by NeilKilleen)

NeilKilleen